github desktop push issue with .git file

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I’m using github desktop to push all my code on github. I was able to push all the original code, files when I created a new repo. Now I want to push all the updated files to the github site. I already committed on the local repo, all the repo is only 2 MB, but github desktop created a hidden .git file which is 200 MB, larger than the limit of github. So I can not push my code on my github repo.


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